Publications

Found 117 results
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Langille MGI, Zaneveld J, J Caporaso G, McDonald D, Knights D, Reyes JA, Clemente JC, Burkepile DE, Thurber RLVega, Knight R et al..  2013.  Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nature biotechnology. 31:814–821.
Ladd MC, Shantz AA, Bartels E, Burkepile DE.  2017.  Thermal stress reveals a genotype-specific tradeoff between growth and tissue loss in restored Acropora cervicornis. Marine Ecology Progress Series. 572:129–139.
Ladd MC, Shantz AA, Nedimyer K, Burkepile DE.  2016.  Density dependence drives habitat production and survivorship of Acropora cervicornis used for restoration on a Caribbean coral reef. Frontiers in Marine Science. 3
Ladd MC, Miller MW, Hunt JH, Sharp WC, Burkepile DE.  2018.  Harnessing ecological processes to facilitate coral restoration. Frontiers in Ecology and the Environment.
Ladd MC, Burkepile DE.  2018.  A response to Doropoulos and Babcock. Frontiers in Ecology and the Environment. 16:559–560.
Ladd MC, Burkepile DE, Shantz AA.  2019.  Near-term impacts of coral restoration on target species, coral reef community structure, and ecological processes. Restoration Ecology. 27:1166–1176.
Ladd MC, Shantz AA, Burkepile DE.  2019.  Newly dominant benthic invertebrates reshape competitive networks on contemporary Caribbean reefs. Coral Reefs. :1–12.
Ladd MC, Winslow EM, Burkepile DE, Lenihan HS.  2021.  Corallivory varies with water depth to influence the growth of Acropora hyacinthus, a reef-forming coral. Ecosphere. 12:e03623.
LA Dell C, Longo GO, Burkepile DE, Manfrino C.  2020.  Few Herbivore Species Consume Dominant Macroalgae on a Caribbean Coral Reef. Frontiers in Marine Science. 7:676.
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Koerner SE, Burkepile DE, Fynn RWS, Burns CE, Eby S, Govender N, Hagenah N, Matchett KJ, Thompson DI, Wilcox KR et al..  2014.  Plant community response to loss of large herbivores differs between North American and South African savanna grasslands. Ecology. 95:808–816.PDF icon koerner_etal_2014_ecology.pdf (4.55 MB)
Koerner SE, Smith MD, Burkepile DE, Hanan NP, Avolio ML, Collins SL, Knapp AK, Lemoine NP, Forrestel EJ, Eby S et al..  2018.  Change in dominance determines herbivore effects on plant biodiversity. Nature Ecology & Evolution. :1.
Knapp AK, Hoover DL, Blair JM, Buis G, Burkepile DE, Chamberlain A, Collins SL, Fynn RWS, Kirkman KP, Smith MD et al..  2012.  A test of two mechanisms proposed to optimize grassland aboveground primary productivity in response to grazing. Journal of Plant Ecology.
J Klinges G, Rosales SM, McMinds R, Shaver EC, Shantz AA, Peters EC, Eitel M, Wörheide G, Sharp KH, Burkepile DE et al..  2019.  Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov. The ISME journal. 13:2938–2953.
Kirkman KP, Collins SL, Smith MD, Knapp AK, Burkepile DE, Burns CE, Fynn RWS, Hagenah N, Koerner SE, Matchett KJ et al..  2014.  Responses to fire differ between South African and North American grassland communities. Journal of Vegetation Science. 25:793–804.PDF icon kirkman_et_al_j_veg_sci_2014.pdf (446.27 KB)
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Hay ME, Parker JD, Burkepile DE, Caudill CC, Wilson AE, Hallinan ZP, Chequer AD.  2004.  Mutualisms and aquatic community structure: the enemy of my enemy is my friend. Annual Review of Ecology, Evolution, and Systematics. :175–197.
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Forbes ES, J Cushman H, Burkepile DE, Young TP, Klope M, Young HS.  2019.  Synthesizing the effects of large, wild herbivore exclusion on ecosystem function. Functional Ecology. 33:1597–1610.
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Ezzat L, Lamy T, Maher RL, Munsterman KS, Landfield K, Schmeltzer ER, Gaulke CA, Burkepile DE, Thurber RVega.  2019.  Surgeonfish feces increase microbial opportunism in reef-building corals. Marine Ecology Progress Series. 631:81–97.
Ezzat L, Lamy T, Maher RL, Munsterman KS, Landfield KM, Schmeltzer ER, Clements CS, Thurber RLVega, Burkepile DE.  2020.  Parrotfish predation drives distinct microbial communities in reef-building corals. Animal Microbiome. 2:5.
Ezzat L, Merolla S, Clements CS, Munsterman KS, Landfield K, Stensrud C, Schmeltzer ER, Burkepile DE, Thurber RVega.  2021.  Thermal Stress Interacts With Surgeonfish Feces to Increase Coral Susceptibility to Dysbiosis and Reduce Tissue Regeneration. Frontiers in Microbiology. 12:620458.
Eby S, Burkepile DE, Fynn RWS, Burns CE, Govender N, Hagenah N, Koerner SE, Matchett KJ, Thompson DI, Wilcox KR et al..  2014.  Loss of a large grazer impacts savanna grassland plant communities similarly in North America and South Africa. Oecologia. 175:293–303.PDF icon eby_et_al_oecologia_2014.pdf (428.54 KB)
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Duran A, Collado-Vides L, Burkepile DE.  2016.  Seasonal regulation of herbivory and nutrient effects on macroalgal recruitment and succession in a Florida coral reef. PeerJ. 4:e2643.
Duran A, Shantz AA, Burkepile DE, Collado-Vides L, Ferrer VM, Palma L, Ramos A, Gonzalez-Díaz SP.  2018.  Fishing, pollution, climate change, and the long-term decline of coral reefs off Havana, Cuba. Bulletin of Marine Science.
Duran A, Collado-Vides L, Palma L, Burkepile DE.  2018.  Interactive effects of herbivory and substrate orientation on algal community dynamics on a coral reef. Marine biology. 165:156.
Duran A, Adam TC, Palma L, Moreno S, Collado-Vides L, Burkepile DE.  2019.  Feeding behavior in Caribbean surgeonfishes varies across fish size, algal abundance, and habitat characteristics. Marine Ecology. 40:e12561.
Dougan KE, Ladd MC, Fuchs C, Thurber RLisette Ve, Burkepile D, Rodriguez-Lanetty M.  2020.  Nutrient pollution and predation differentially affect innate immune pathways in the coral Porites porites. Frontiers in Marine Science. 7:742.

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