Interactions between fire and bark beetles in an old growth pine forest. Forest Ecology and Management. 144:245–254.. 2001.
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proceedings of the National Academy of Sciences of the United States of America. 102:14683–14688.. 2005.
Denitrifier community composition along a nitrate and salinity gradient in a coastal aquifer. Applied and Environmental Microbiology. 72:2102–2109.. 2006.
Beach sands along the California coast are diffuse sources of fecal bacteria to coastal waters. Environmental science & technology. 41:4515–4521.. 2007.
Frequent occurrence of the human-specific Bacteroides fecal marker at an open coast marine beach: relationship to waves, tides and traditional indicators. Environmental Microbiology. 9:2038–2049.. 2007.
Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary. Environmental Microbiology. 10:1068–1079.. 2008.
Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current. Environmental Microbiology. 12:1989–2006.. 2010.
Contrasting spring and summer phytoplankton dynamics in the nearshore Southern California Bight. Limnology and Oceanography. 55:264.. 2010.
Flow effects on benthic grazing on phytoplankton by a Caribbean reef. Limnology and Oceanography. 55:1881–1892.. 2010.
Microbial nitrogen cycling at the saltwater–freshwater interface. Hydrogeology Journal. 18:187–202.. 2010.
11 Assessment of Nitrogen and Oxygen Isotopic Fractionation During Nitrification and Its Expression in the Marine Environment. Methods in enzymology. 486:253.. 2011.
Enrichment and characterization of ammonia-oxidizing archaea from the open ocean: phylogeny, physiology and stable isotope fractionation. The ISME journal. 5:1796–1808.. 2011.
Isotopic signature of N2O produced by marine ammonia-oxidizing archaea. Science. 333:1282–1285.. 2011.
Coupled physical, chemical, and microbiological measurements suggest a connection between internal waves and surf zone water quality in the Southern California Bight. Continental Shelf Research. 34:64–78.. 2012.
Cellular maintenance processes that potentially underpin the survival of subseafloor fungi over geological timescales. Estuarine, Coastal and Shelf Science. 164:A1–A9.. 2015.
Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter. The ISME journal. 9:1747–1763.. 2015.
Genomic and proteomic characterization of “Candidatus Nitrosopelagicus brevis”: An ammonia-oxidizing archaeon from the open ocean. Proceedings of the National Academy of Sciences. 112:1173–1178.. 2015.
Microbial community composition and nitrogen availability influence DOC remineralization in the South Pacific Gyre. Marine Chemistry. 177:325–334.. 2015.
Nitrogen cycling in the secondary nitrite maximum of the eastern tropical North Pacific off Costa Rica. Global Biogeochemical Cycles. 29:2061–2081.. 2015.
Distinguishing between Microbial Habitats Unravels Ecological Complexity in Coral Microbiomes. mSystems. 1:e00143–16.. 2016.
Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean.. ISME J. 10(9):2158-2173.. 2016.