An AluI fragment isolated from lake trout (Salvelinus namaycush), maps to the intergenic spacer region of the rDNA cistron. Gene. 186:7–11.. 1997.
Eye-independent, light-activated chromatophore expansion (LACE) and expression of phototransduction genes in the skin of Octopus bimaculoides. The Journal of experimental biology. 218:1513–1520.. 2015.
The last common ancestor of most bilaterian animals possessed at least 9 opsins. Genome biology and evolution. :evw248.. 2016.
Understanding the dermal light sense in the context of integrative photoreceptor cell biology. Visual neuroscience. 28:265–279.. 2011.
The Evolution of Complexity in the Visual Systems of Stomatopods: Insights from Transcriptomics. Integrative and comparative biology. 53:39–49.. 2013.
DATA FROM The evolution of complexity in the visual systems of stomatopods: insights from transcriptomics.. 2013.
The origins of novel protein interactions during animal opsin evolution. PLoS One. 2:e1054.. 2007.
Cnidocyte discharge is regulated by light and opsin-mediated phototransduction. BMC biology. 10:17.. 2012.
On the evolution of the animal phototransduction cascades. Ecology Evolution and Marine Biology. PhD:131.. 2009.
Key transitions during the evolution of animal phototransduction: novelty,“tree-thinking,” co-option, and co-duplication. Integrative and Comparative Biology. 47:759–769.. 2007.
New insights into the evolutionary history of photoreceptor cells. Trends in ecology & evolution. 20:465–467.. 2005.
The evolution of phototransduction from an ancestral cyclic nucleotide gated pathway. Proceedings of the Royal Society B: Biological Sciences. 277:1963.. 2010.
Prolific origination of eyes in Cnidaria with co-option of non-visual opsins. Current Biology. 28:2413–2419.. 2018.
Evidence supporting the paraphyly of Hucho (Salmonidae) based on ribosomal DNA restriction maps. Journal of fish biology. 47:956–961.. 1995.
Phylogenetic relationships among the Salmoninae based on nuclear and mitochondrial DNA sequences.. Molecular systematics of fishes. Academic Press, London.. 1997.
Eye-specification genes in the bacterial light organ of the bobtail squid Euprymna scolopes and their expression in response to symbiont cues. Mechanisms of development. 131:111-126.. 2014.
Comparative tests of evolutionary trade-offs in a palinurid lobster acoustic system. Evolution. 57:2082–2100.. 2003.
Predictable transcriptome evolution in the convergent and complex bioluminescent organs of squid. Proceedings of the National Academy of Sciences.. 2014.
Repression and loss of gene expression outpaces activation and gain in recently duplicated fly genes. Proceedings of the National Academy of Sciences. 103:11637.. 2006.
Independent contrasts succeed where ancestor reconstruction fails in a known bacteriophage phylogeny. Evolution. 54:397–405.. 2000.
Osiris: accessible and reproducible phylogenetic and phylogenomic analyses within the Galaxy workflow management system. BMC Bioinformatics. 15:230.. 2014.
The eye as a replicating and diverging, modular developmental unit. TRENDS in Ecology and Evolution. 18:623–627.. 2003.
A review of Gene Sharing and Evolution: The Diversity of Protein Functions, by Joram Piatigorsky. Evolution & Development. 9:514–516.. 2007.
How Complexity Originates: The Evolution of Animal Eyes. Annual Review of Ecology, Evolution, and Systematics. 46. 2015.
Comparative methods for the analysis of gene-expression evolution: an example using yeast functional genomic data. Molecular biology and evolution. 22:40–50.. 2005.