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Burkepile DE, Moore MT, Holland MM.  2000.  Susceptibility of five nontarget organisms to aqueous diazinon exposure. Bulletin of environmental contamination and toxicology. 64:114–121.
Burkepile DE, Allgeier JE, Shantz AA, Pritchard CE, Lemoine NP, Bhatti LH, Layman CA.  2013.  Nutrient supply from fishes facilitates macroalgae and suppresses corals in a Caribbean coral reef ecosystem. Scientific reports. 3
Burkepile DE, Schmitt MH, Stears K, Donovan MK, Thompson DI.  2020.  Shared Insights across the Ecology of Coral Reefs and African Savannas: Are Parrotfish Wet Wildebeest? BioScience. 70:647–658.
Burkepile DE, Fynn RWS, Thompson DI, Lemoine NP, Koerner SE, Eby S, Hagenah N, Wilcox KR, Collins SL, Kirkman KP et al..  2017.  Herbivore size matters for productivity–richness relationships in African savannas. Journal of Ecology. 105:674–686.
Burkepile DE, Parker JD, C Woodson B, Mills HJ, Kubanek J, Sobecky PA, Hay ME.  2006.  Chemically mediated competition between microbes and animals: microbes as consumers in food webs. Ecology. 87:2821–2831.
Burkepile DE.  2013.  Comparing aquatic and terrestrial grazing ecosystems: is the grass really greener? Oikos. 122:306–312.PDF icon burkepile_oikos_2013.pdf (563.42 KB)
Burkepile DE, Shantz AA, Adam TC, Munsterman KS, Speare KE, Ladd MC, Rice MM, Ezzat L, McIlroy S, Wong JCY et al..  2020.  Nitrogen Identity Drives Differential Impacts of Nutrients on Coral Bleaching and Mortality. Ecosystems. 23:798–811.
Burkepile DE, Hay ME.  2007.  Predator release of the gastropod Cyphoma gibbosum increases predation on gorgonian corals. Oecologia. 154:167–173.
Burkepile DE, Thompson DI, Fynn RWS, Koerner SE, Eby S, Govender N, Hagenah N, Lemoine NP, Matchett KJ, Wilcox KR et al..  2016.  Fire frequency drives habitat selection by a diverse herbivore guild impacting top–down control of plant communities in an African savanna. Oikos. PDF icon burkepile_et_al_oikos_2016.pdf (1.78 MB)
Burkepile DE, Hay ME.  2008.  Herbivore species richness and feeding complementarity affect community structure and function on a coral reef. Proceedings of the National Academy of Sciences. 105:16201.
Burkepile DE.  2006.  Separate and Interactive Effects of Consumers and Nutrient Enrichment on the Structure of Benthic Marine Communities.
Burkepile DE, Thurber RVega.  2019.  The Long Arm of Species Loss: How Will Defaunation Disrupt Ecosystems Down to the Microbial Scale? BioScience. 69:443–454.
Burkepile DE, Hay ME, .  2009.  Nutrient versus herbivore control of macroalgal community development and coral growth on a Caribbean reef. Marine Ecology Progress Series. 389:71–84.
Burkepile DE, Burns CE, Tambling CJ, Amendola E, Buis GM, Govender N, Nelson V, Thompson DI, Zinn AD, Smith MD.  2013.  Habitat selection by large herbivores in a southern African savanna: the relative roles of bottom-up and top-down forces. Ecosphere. 4:art139.
Burkepile DE, Hay ME.  2006.  Herbivore vs. nutrient control of marine primary producers: context-dependent effects. Ecology. 87:3128–3139.
Burkepile DE.  2011.  Context-dependent corallivory by parrotfishes in a Caribbean reef ecosystem. Coral Reefs. :1–10.
Burkepile DE, Adam TC, Roycroft M, Ladd MC, Munsterman KS, Ruttenberg BI.  2019.  Species-specific patterns in corallivory and spongivory among Caribbean parrotfishes. Coral Reefs. 38:417–423.
Burkepile DE, Hay ME.  2010.  Impact of herbivore identity on algal succession and coral growth on a Caribbean reef. PloS one. 5:e8963.
Burkepile D.  2009.  Herbivory. Encyclopedia of Earth.
Burkepile DE, Hay ME.  2011.  Feeding complementarity versus redundancy among herbivorous fishes on a Caribbean reef. Coral Reefs. 30:351–362.
Burkepile DE, Parker JD.  2017.  Recent advances in plant-herbivore interactions. F1000Research. 6
Buis GM, Blair JM, Burkepile DE, Burns CE, Chamberlain AJ, Chapman PL, Collins SL, Fynn RWS, Govender N, Kirkman KP et al..  2009.  Controls of aboveground net primary production in mesic savanna grasslands: an inter-hemispheric comparison. Ecosystems. 12:982–995.