Publications
Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms. BMC bioinformatics. 15:350.
.
2014. Understanding the dermal light sense in the context of integrative photoreceptor cell biology. Visual neuroscience. 28:265–279. (297.05 KB)
.
2011. Symbiotic organs shaped by distinct modes of genome evolution in cephalopods. Proceedings of the National Academy of Sciences. :201817322.
.
2019. Opening the “black box”: the genetic and biochemical basis of eye evolution. Evolution: Education and Outreach. 1:390–402. (342.38 KB)
.
2008. Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution. Proc. R. Soc. B.
.
2017. The last common ancestor of most bilaterian animals possessed at least 9 opsins. Genome biology and evolution. :evw248.
.
2016. Gene duplication and the origins of morphological complexity in pancrustacean eyes, a genomic approach. BMC evolutionary biology. 10:123.
.
2010. Eye-specification genes in the bacterial light organ of the bobtail squid Euprymna scolopes and their expression in response to symbiont cues. Mechanisms of development. 131:111-126. (3.54 MB)
.
2014. Evolutionary relatedness does not predict competition and co-occurrence in natural or experimental communities of green algae. Proceedings of the Royal Society B: Biological Sciences. 282:20141745.
.
2015. Different phylogenomic methods support monophyly of enigmatic ‘Mesozoa’(Dicyemida+ Orthonectida, Lophotrochozoa). Proceedings of the Royal Society B. 289:20220683.
.
2022.