Publications
Understanding the dermal light sense in the context of integrative photoreceptor cell biology. Visual neuroscience. 28:265–279.
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2011. 
Eye-independent, light-activated chromatophore expansion (LACE) and expression of phototransduction genes in the skin of Octopus bimaculoides. The Journal of experimental biology. 218:1513–1520.
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2015. The last common ancestor of most bilaterian animals possessed at least 9 opsins. Genome biology and evolution. :evw248.
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2016. An AluI fragment isolated from lake trout (Salvelinus namaycush), maps to the intergenic spacer region of the rDNA cistron. Gene. 186:7–11.
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1997. Ontogeny of sexual dimorphism via tissue duplication in an ostracod (Crustacea). Evolution & Development. 11:233–243.
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2009. Gene duplication and the origins of morphological complexity in pancrustacean eyes, a genomic approach. BMC evolutionary biology. 10:123.
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2010. Blue-light-receptive cryptochrome is expressed in a sponge eye lacking neurons and opsin. The Journal of experimental biology. 215:1278–1286.
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2012. 
The new biology: beyond the Modern Synthesis. Biology direct. 2:30.
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2007. A post-synaptic scaffold at the origin of the animal kingdom. PLoS One. 2:e506.
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2007. Evolutionary expansion and specialization of the PDZ domains. Molecular biology and evolution. 27:1058–1069.
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2010. Reconstructing ancestral genome content based on symmetrical best alignments and Dollo parsimony. Bioinformatics. 24:606.
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2008. 
The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes. Journal of Heredity. 105:1-18.
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2014. Hierarchical phylogenetics as a quantitative analytical framework for evolutionary developmental biology. Bioessays. 27:1158–1166.
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2005. Sequence, overproduction and purification of Vibrio proteolyticus ribosomal protein L 18 for in vitro and in vivo studies. Gene. 183:237–242.
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1996. Evasion of Predators Contributes to the Maintenance of Male Eyes in Sexually Dimorphic Euphilomedes ostracods (Crustacea). Integrative and comparative biology. 53:78–88.
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2013. 
Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms. BMC bioinformatics. 15:350.
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2014. The Amphimedon queenslandica genome and the evolution of animal complexity. Nature. 466:720–726.
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2010. A Transcriptomic Analysis of Cave, Surface, and Hybrid Isopod Crustaceans of the Species Asellus aquaticus. PloS one. 10:e0140484.
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2015. Bioluminescent Signals.
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2018. 
Multimodal sensorimotor system in unicellular zoospores of a fungus. Journal of Experimental Biology. 221
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2012. Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution. Proc. R. Soc. B.
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2017. Erratic rates of molecular evolution and incongruence of fossil and molecular divergence time estimates in Ostracoda (Crustacea). Molecular phylogenetics and evolution. 48:157–167.
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2008. Evidence for light perception in a bioluminescent organ. Proceedings of the National Academy of Sciences. 106:9836.
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2009.