Publications
Found 85 results
Author Title [ Type
] Year Filters: First Letter Of Last Name is O and Author is Oakley, Todd H [Clear All Filters]
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1997. An AluI fragment isolated from lake trout (Salvelinus namaycush), maps to the intergenic spacer region of the rDNA cistron. Gene. 186:7–11.
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2018. Bioluminescent Signals. 
(2.98 MB)
(2.98 MB).
2012. Blue-light-receptive cryptochrome is expressed in a sponge eye lacking neurons and opsin. The Journal of experimental biology. 215:1278–1286. (1.07 MB)
(1.07 MB).
2012. Cnidocyte discharge is regulated by light and opsin-mediated phototransduction. BMC biology. 10:17.
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2023. Collective synchrony of mating signals modulated by ecological cues and social signals in bioluminescent sea fireflies. Proceedings of the Royal Society B. 290:20232311.
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2014. The comb jelly opsins and the origins of animal phototransduction. Genome biology and evolution. 6:1964–1971.
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2006. CoMET: A Mesquite package for comparing models of continuous character evolution on phylogenies. Evolutionary Bioinformatics Online. 2:183.
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2005. Comparative methods for the analysis of gene-expression evolution: an example using yeast functional genomic data. Molecular biology and evolution. 22:40–50.
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2019. Context-dependent evolution of ostracod morphology along the ecogeographical gradient of ocean depth. Evolution. (579.69 KB)
(579.69 KB).
2022. Deep diversity: extensive variation in the components of complex visual systems across animals. Cells. 11:3966.
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2022. Different phylogenomic methods support monophyly of enigmatic ‘Mesozoa’(Dicyemida+ Orthonectida, Lophotrochozoa). Proceedings of the Royal Society B. 289:20220683.
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2004. Differential expression of duplicated opsin genes in two eyetypes of ostracod crustaceans. Journal of molecular evolution. 59:239–249.
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2012. Dispersal between shallow and abyssal seas and evolutionary loss and regain of compound eyes in cylindroleberidid ostracods: conflicting conclusions from different comparative methods. Systematic biology. 61:314–336. (1.27 MB)
(1.27 MB).
2015. The dynamic evolutionary history of pancrustacean eyes and opsins. Integrative and Comparative Biology. :icv100. (5.07 MB)
(5.07 MB).
2018. Ecological engineering helps maximize function in algal oil production. Applied and environmental microbiology. :AEM–00953.
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2017. Ecological interactions and coexistence are predicted by gene expression similarity in freshwater green algae. Journal of Ecology. 105:580–591.
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2011. The ecoresponsive genome of Daphnia pulex. Science. 331:555.
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2008. Erratic rates of molecular evolution and incongruence of fossil and molecular divergence time estimates in Ostracoda (Crustacea). Molecular phylogenetics and evolution. 48:157–167.
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2008. Euphilomedes chupacabra (Ostracoda: Myodocopida: Philomedidae), a new demersal marine species from coastal Puerto Rico with male-biased vespertine swimming activity. Zootaxa. 1684:35–57. (954.14 KB)
(954.14 KB).
2013. Evasion of Predators Contributes to the Maintenance of Male Eyes in Sexually Dimorphic Euphilomedes ostracods (Crustacea). Integrative and comparative biology. 53:78–88. (254.54 KB)
(254.54 KB).
2009. Evidence for light perception in a bioluminescent organ. Proceedings of the National Academy of Sciences. 106:9836.
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2013. The Evolution of Complexity in the Visual Systems of Stomatopods: Insights from Transcriptomics. Integrative and comparative biology. 53:39–49.
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2010. The evolution of phototransduction from an ancestral cyclic nucleotide gated pathway. Proceedings of the Royal Society B: Biological Sciences. 277:1963.
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2008. Evolutionary history and the effect of biodiversity on plant productivity. Proceedings of the National Academy of Sciences. 105:17012.